How can I get the exon usage value?

[h20gg702]

Hi, Thanks for developing this database. Could you tell me how can I download the exon usage value? If my understanding is correct, data downloaded from the "Download Data" include only the original or normalized exon count value?

[wenjie1991]

Hi, the value is "RPKM (Reads Per Kilobase of exon model per Million mapped reads)" for the exon value in the table from "Download Data". And for the isoform and gene expression, they are the normalized expression value calculated by RSEM. Here are the link of original data:

http://gdac.broadinstitute.org/runs/stddata__2016_01_28/data/ACC/20160128/gdac.broadinstitute.org_ ACC.Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data.Level_3.2016012800.0.0.tar.gz
http://gdac.broadinstitute.org/runs/stddata__2016_01_28/data/ACC/20160128/gdac.broadinstitute.org_ ACC.Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data.Level_3.2016012800.0.0.tar.gz
http://gdac.broadinstitute.org/runs/stddata__2016_01_28/data/ACC/20160128/gdac.broadinstitute.org_ ACC.Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data.Level_3.2016012800.0.0.tar.gz
http://gdac.broadinstitute.org/runs/stddata__2016_01_28/data/ACC/20160128/gdac.broadinstitute.org_ ACC.Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data.Level_3.2016012800.0.0.tar.gz

[h20gg702]

This exon usage value in this figure can be downloaded? Are these value in this figure is same in the the exon value in the table from "Download Data"?