wenjiegroup / ProMEP

Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning
Apache License 2.0
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Cannot run inference #4

Open Xinheng-He opened 4 months ago

Xinheng-He commented 4 months ago

Dear developers: Thanks for sharing your code and Ireally feel interested in apply it on our cases. However, when I run the example code, I meet the problem: fid = h5f.open(name, flags, fapl=fapl) File "h5py/_objects.pyx", line 54, in h5py._objects.with_phil.wrapper File "h5py/_objects.pyx", line 55, in h5py._objects.with_phil.wrapper File "h5py/h5f.pyx", line 106, in h5py.h5f.open FileNotFoundError: [Errno 2] Unable to open file (unable to open file: name = './data/PPI/human/test/Resolution-level-1/pdb_pointClouds.h5', errno = 2, error message = 'No such file or directory', flags = 0, o_flags = 0) I only see two h5 files in ./testdata/fitness_prediction.h5 ./testdata/stability_prediction.h5 It seems different from the pdb_pointClouds.h5 needed, maybe you can upload it? Thanks.