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wfdb / mimic_wfdb_tutorials

Tutorials on using the MIMIC Waveform Database
https://wfdb.io/mimic_wfdb_tutorials/
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Build warning: ModuleNotFoundError: No module named 'wfdb' #17

Closed tompollard closed 2 years ago

tompollard commented 2 years ago

When building the book with jupyter-book build --all content I receive the following warnings:

WARNING: Execution Failed with traceback saved in /Users/USER/projects/mimic_wfdb_tutorials/content/_build/html/reports/data-exploration.log
WARNING: Execution Failed with traceback saved in /Users/USER/projects/mimic_wfdb_tutorials/content/_build/html/reports/data-extraction.log
WARNING: Execution Failed with traceback saved in /Users/USER/projects/mimic_wfdb_tutorials/content/_build/html/reports/data-visualisation.log

The logs includes the following error:

------------------
# setup
import sys
import wfdb
------------------

---------------------------------------------------------------------------
ModuleNotFoundError                       Traceback (most recent call last)
Input In [1], in <cell line: 3>()
      1 # setup
      2 import sys
----> 3 import wfdb

ModuleNotFoundError: No module named 'wfdb'
ModuleNotFoundError: No module named 'wfdb'

Presumably we need to add wfdb to requirements.txt