IndexError: index 5 is out of bounds for axis 0 with size 4

[myseverus]

Traceback (most recent call last): File "C:/Users/20825/Desktop/bioinformations/DEAttentionDTA-main1/src/main.py", line 45, in train_dataset = MyDataset('core2013',data_path, max_seq_len, max_smi_len) File "C:\Users\20825\Desktop\bioinformations\DEAttentionDTA-main1\src\Dataset.py", line 72, in init position[row[1]] = eval(row[5]) File "C:\anaconda\envs\train\lib\site-packages\pandas\core\series.py", line 978, in getitem return self._values[key] IndexError: index 5 is out of bounds for axis 0 with size 4 Hello, author, this error occurs when I run core2013 file, how should I solve it, thank you very much

[whatamazing1]

core2013 don't have the position attribute，and there is no position data in its data table，if you want to get the inference result of core2013, you can choose to run src-v2/main.py, v2 don't need the position。

[myseverus]

Thank you for your answer. I was wondering if you could explain the difference between the src and srcv2 files.

---Original--- From: @.> Date: Mon, Nov 18, 2024 11:03 AM To: @.>; Cc: @.**@.>; Subject: Re: [whatamazing1/DEAttentionDTA] IndexError: index 5 is out ofbounds for axis 0 with size 4 (Issue #2)

core2013 don't have the position attribute，and there is no position data in its data table，if you want to get the inference result of core2013, you can choose to run src-v2/main.py, v2 don't need the position。

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[whatamazing1]

https://academic.oup.com/bioinformatics/article/40/6/btae319/7696315
I explained in detail the differences between v1 and v2 in my article。