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whitews / FlowKit

A Python toolkit for flow cytometry analysis supporting GatingML and FlowJo workspaces
https://flowkit.readthedocs.io
BSD 3-Clause "New" or "Revised" License
153 stars 38 forks source link

FCS 3.2 support #182

Open gabrielpan147 opened 8 months ago

gabrielpan147 commented 8 months ago

Is your feature request related to a problem? Please describe. I would like to use FlowJo 10.0 with a FCS 3.2 format file. Currently FlowKit seems to be only supporting FCS 3.1

Describe the solution you'd like It would be great if you can develop a new version that support reading FCS 3.2

whitews commented 7 months ago

Hi Gabriel,

Yes, I would like to support the new 3.2 format but currently do not access to any 3.2 files. Support for this will go into the lower level FlowIO library I maintain and there is an issue here if you want to track the progress. If you have any 3.2 files you could share it would be appreciated and speed things up.

Kind regards, Scott

gabrielpan147 commented 6 months ago

Hello Scott,

Thank you for your reply! Here is a demo FCS3.2 file FYI. Hopefully this helps the progress.

Best, Gabriel

whitews commented 6 months ago

Thanks Gabriel! This will definitely help out.