Hi Katie and Mike
I am trying to use OutFLANK on my haploid dataset of about 8000 SNP on 4 populations. So I am about to use the WC_FST_FiniteSample_Haploids_2AllelesB_NoSamplingCorrection(AllCounts) but it is not clear to me how Allcounts should be presented.
Say I have 5 loci and 2 populations of 30 individuals each, is Allcounts looking like this ?
Hi Katie and Mike I am trying to use OutFLANK on my haploid dataset of about 8000 SNP on 4 populations. So I am about to use the WC_FST_FiniteSample_Haploids_2AllelesB_NoSamplingCorrection(AllCounts) but it is not clear to me how Allcounts should be presented.
Say I have 5 loci and 2 populations of 30 individuals each, is Allcounts looking like this ?
(pop1)10 20 (pop2) 15 15 (pop1)15 15 (pop2) 5 25 (pop1)18 12 (pop2) 20 10 (pop1)30 0 (pop2) 25 5 (pop1)10 20 (pop2)15 15 or like this? (pop1) 10 20 15 15 18 12 30 0 10 20 (pop2) 15 15 5 25 20 10 25 5 15 15
Thank you in advance Christophe