search

wholeGenomeSequencingAnalysisPipeline / BacPipe

GNU General Public License v3.0
8 stars 9 forks source link

Problem initializing BacPipe: AppJar module #2

Closed wholeGenomeSequencingAnalysisPipeline closed 5 years ago

wholeGenomeSequencingAnalysisPipeline commented 7 years ago

No module named appJar

  Traceback (most recent call last):
  File "./Pipeline.py", line 3, in <module>
  from appJar import gui
  ImportError: No module named appJar

Solution:

AppJar should be already included in BacPipe and no need for installation, yet this is how you would install it:

Install appJar as indicated in the installation instructions.

First install "pip" command as following (more details can be seen here: https://pip.pypa.io/en/stable/installing/):

  sudo apt-get install python-pip

or:

  sudo easy_install pip

Then install appjar as following (or follow the instructions here: appjar.info/Install/):

 sudo pip install appjar