Closed Miskinis closed 1 year ago
That happens when you edit the pyproject.toml
file without using poetry
itself. The way to fix this is to delete your virtual environment, delete the lock file, and then poetry install
. That can have the impact of updating or changing library versions and causing other effects, so ... if you can reverse the changes you made in the toml
file, do that first and make sure to use Poetry to make adjustments.
EDIT: the lock
and toml
files get out of alignment when you don't use Poetry to make changes.
I didn't edit pyproject.toml
manually, I used poetry add
, but since my poetry is 1.4.0 and container's is 1.1, it's probably incompatible.
I fixed it by adding RUN pipx upgrade poetry
to backend docker file, right before it executes poetry install
By the way, deleting lock file doesn't fix the problem. If it stays deleted, then docker complains about not finding dependencies for pytest-cov
and if I regenerate the lock, I end up where I started.
Yeah, if you delete the lock file you need to re-run poetry install
to regenerate it. The version mismatch may have caused your problems, though.
Just to add a reference to this issue for future search: https://inboard.bws.bio/docker#docker-and-poetry
Inboard now uses Hatch for Python dependency management and packaging. Poetry 1.1 was used before Hatch, and Poetry 1.1 is still included in the Docker images for backwards compatibility. If you have a downstream project using the inboard Docker images with a newer version of Poetry, you can add RUN pipx upgrade poetry or RUN pipx install poetry>1.2 --force to your Dockerfile to upgrade Poetry for your project.
Any attempt at using
poetry add
, causes aThe lock file is not compatible with the current version of Poetry
error when building docker. I'm using poetry 1.4.0