widdowquinn / find_differential_primers

Code for design of diagnostic PCR primers, and metabarcoding markers.

https://widdowquinn.github.io/find_differential_primers/

MIT License

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Primer3 v2 #36

Closed widdowquinn closed 5 years ago

widdowquinn commented 5 years ago

This PR adds a subcommand that enables direct use of Primer3 (v2+) rather than EMBOSS ePrimer3 to design candidate primer sets.

codecov[bot] commented 5 years ago

Codecov Report

Merging #36 into diagnostic_primers will decrease coverage by 4.69%. The diff coverage is 46.4%.

@@                  Coverage Diff                  @@
##           diagnostic_primers      #36     +/-   ##
=====================================================
- Coverage               75.27%   70.57%   -4.7%     
=====================================================
  Files                      59       63      +4     
  Lines                    2572     2814    +242     
=====================================================
+ Hits                     1936     1986     +50     
- Misses                    636      828    +192