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wiggins-lab / SuperSegger

A completely automated MATLAB-based trainable image cell segmentation, fluorescence quantification and analysis suite, particularly well suited for high-throughput time lapse fluorescence microscopy of in vivo bacterial cells.
GNU General Public License v3.0
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Random multiple errors #29

Open jimmysantander opened 5 years ago

jimmysantander commented 5 years ago

Hi all, I think I might be having and issue with cells getting ID=0. At the moment I am using the last version of supersegger. I have been able to run it a couple of times successfully, but mots of the times I get the same error, which I paste here:

Error using multiAssignmentSparse/getRevAssign (line 460) Cell contents indices must be greater than 0

Error in multiAssignmentSparse (line 349) revAssign = getRevAssign();

Error in trackOptiLinkCellMulti (line 151) data_c.regs.revmap.r] = assignmentFun (data_c, data_r,CONST,0,0);

Error in trackOpti (line 93) trackOptiLinkCellMulti(dirname_seg, delete_old_err_files, CONST, header);

Error in BatchSuperSeggerOpti>intProcessXY (line 350) trackOpti(dirname_xy,skip,CONST, header, startEnd);

Error in BatchSuperSeggerOpti (line 215) parfor(j = 1:num_xy,workers)

Error in superSeggerGui>segment_images_Callback (line 213) BatchSuperSeggerOpti(dirname, skip, clean_flag, CONST, startEnd);

Error in gui_mainfcn (line 95) feval(varargin{:});

Error in superSeggerGui (line 38) gui_mainfcn(gui_State, varargin{:});

Error in matlab.graphics.internal.figfile.FigFile/read>@(hObject,eventdata)superSeggerGui('segment_images_Callback',hObject,eventdata,guidata(hObject)) Error while evaluating UIControl Callback

Thanks for your help!