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wikipathways / GPML2RDF

GPML2RDF converter
Apache License 2.0
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WP rdf files with incorrect DOI IRIs #101

Closed marvinm2 closed 3 years ago

marvinm2 commented 3 years ago

With the March 2021 release, 3 WPs caused syntax errors in the Turtle files causing problems with data loading in the SPARQL endpoint:

These have DOIs in them that do not work: WP1919: https://doi.org/10.1379/1466-1268(2003)8<37:IVRFVA2.0.CO;2> WP4432: https://doi.org/10.1379/1466-1268(2001)006<0297:TNTATB2.0.CO;2> WP3395: https://doi.org/10.1379/1466-1268(2004)009<0021:TRABOH2.0.CO;2> and https://doi.org/10.1379/1466-1268(1996)001<0237:APOMCI2.3.CO;2>

These WPs are all Reactome converted and had a recent change

egonw commented 3 years ago

Fixed in https://github.com/wikipathways/GPML2RDF/commit/4d51d606635f9eb8a34ab9349e93bb6d6d552a74

egonw commented 3 years ago

Fixed in the development version.

egonw commented 3 years ago

Fixed now applied to master.