wikipathways / cytoscape-wikipathways-app

WikiPathways app for Cytoscape to open and access pathways from WikiPathways
Apache License 2.0
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The cellular compartment should be an annotation, not a node #39

Closed AlexanderPico closed 7 years ago

AlexanderPico commented 7 years ago

Opening WP430, we can see that the main cellular compartment shape for the Liver cell is a node, not an annotation. Click on it and see the Node Table display the properties of the node. Right click on it and see there are no options to edit Annotation, etc.

We have code in place to make annotation from GPML shapes, but it is not doing it... https://github.com/wikipathways/cytoscape-wikipathways-app/blob/newBranch/src/main/java/org/wikipathways/cytoscapeapp/DelayedVizProp.java#L130

AdamStuart commented 7 years ago

Duplicate of #30