wikipathways / cytoscape-wikipathways-app

WikiPathways app for Cytoscape to open and access pathways from WikiPathways
Apache License 2.0
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Fake ports in Cytoscape #95

Open AlexanderPico opened 5 years ago

AlexanderPico commented 5 years ago

The app could take the port information in GPMLs and generate "fake" nodes around the periphery of datanodes to serve as port-like targets.

This might solve some of the edge bend issues as well.

This could be a good workaround for viewing GPML in Cytoscape (and cytoscape.js) while port support in those tools is still being discussed/debated.

Alternatively, we could agree to ditch ports in all GPML and related tools! :)