Need command for import-from-file

wikipathways / cytoscape-wikipathways-app

WikiPathways app for Cytoscape to open and access pathways from WikiPathways

Apache License 2.0

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Closed AlexanderPico closed 5 years ago

AlexanderPico commented 5 years ago

Too keep the current commands the same, let's add the following:

wikipathways import-from-file file="filename.gpml" asNetwork=false

AlexanderPico commented 5 years ago

Alternatively, let's add a parameter to each of the two existing commands:

wikipathways import-as-pathway id=... file=...

We then document that folks should use one or the other. See session open as an example.

ariutta commented 5 years ago

Related to #83.

AlexanderPico commented 5 years ago

merging with #83