Closed AlexanderPico closed 2 years ago
Using fill=T made the file readable:
fill=T
chems <- read.table("../exports/pfocr_chemicals.tsv", sep = "\t", stringsAsFactors = F, header = T, fill=T)
...but the data is scuffed. See:
chems[which(chems$figure_id=="PMC5369987__oncotarget-08-16594-g005.jpg"),]
It looks like single quotes (or prime characters) are messing up the read, e.g., adenosine 5'-phosphorothioate. Setting quote="" seems to take care of that.
adenosine 5'-phosphorothioate
quote=""
Now reading in 120,262 rows and 10 columns.
Using
fill=Tmade the file readable:...but the data is scuffed. See:
It looks like single quotes (or prime characters) are messing up the read, e.g.,
adenosine 5'-phosphorothioate. Settingquote=""seems to take care of that.Now reading in 120,262 rows and 10 columns.