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wikipathways / wikipathways-development

Roadmap planning, developer documentation, contribution guidelines
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Deposit images with structured data into Wikimedia Commons #68

Open AlexanderPico opened 2 years ago

AlexanderPico commented 2 years ago

from @andrawaag

Hi Alex, are you aware of Structured data on commons? I got pretty excited recently. I was working on a pet project to navigate specimen collections from natural history museums. This is tarsier (https://andrawaag.github.io/tarsier/index.html) What it does is that it search GBIF (an aggregator for biodiversity data & images) and transfers the images to commons to be reused on wikipedia articles on species. Today I ventured a bit into doing the same for Wikipathways. IMO this has quite some potential to integrate renderings of pathway to wikidata. I started manually adding statements on commons for pathways already there. https://commons.wikimedia.org/wiki/File:CalciumRegulationInCardiacCell_WP536.png and https://www.wikidata.org/wiki/Q30230893 https://commons.wikimedia.org/wiki/File:NicotineChromaffinCells_WP1603.png and https://www.wikidata.org/wiki/Q29883406 Maybe you knew this already, but icymi I thought about dropping it here commons.wikimedia.orgcommons.wikimedia.org File:CalciumRegulationInCardiacCell WP536.png - Wikimedia Commons (359 kB) https://commons.wikimedia.org/wiki/File:CalciumRegulationInCardiacCell_WP536.png

wikidata.orgwikidata.org Calcium regulation in cardiac cells Calcium is a common signaling mechanism, as once it enters the cytoplasm it exerts allosteric regulatory affects on many enzymes and proteins. Calcium can act in signal transduction after influx resulting from activation of ion channels or as a s... commons.wikimedia.orgcommons.wikimedia.org File:NicotineChromaffinCells WP1603.png - Wikimedia Commons (32 kB) https://commons.wikimedia.org/wiki/File:NicotineChromaffinCells_WP1603.png

wikidata.orgwikidata.org Nicotine effect on chromaffin cells Nicotine is an alkaloid found in tobacco plants. It is a substance that acts as a stimulant in humans and is one of the main factors responsible for tobacco dependence. When nicotine enters the body, it is distributed quickly through the bloodstr...