Codon Likelihihoods Learned Against Genome Evolution (CoLLAGE): a deep learning framework for identifying naturally selected patterns of codon preference within a species
Please review #1 first - this PR builds off of it.
Move all logic except for arg parsing out of the top level script and into the collage package. Add epoch argument to specify number of epochs to train on. Minor formatting lints.
Please review #1 first - this PR builds off of it.
Move all logic except for arg parsing out of the top level script and into the collage package. Add epoch argument to specify number of epochs to train on. Minor formatting lints.