denovo peptide sequencing

wilhelm-lab / koina

Democratizing ML in proteomics

https://koina.wilhelmlab.org/

Apache License 2.0

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denovo peptide sequencing #87

Open wenbostar opened 1 month ago

wenbostar commented 1 month ago

Is that possible to support denovo peptide sequencing using tool like Casanovo in koina?

LLautenbacher commented 1 month ago

We need a torchscript/onnx export of the model to make it accessible on Koina. Trying to do that I ran into some issus. I opened an issue with the casanovo developers