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Description of changes
Adds support to directly provide d / hdf files for timsTOF data.
Removed pickle in favour of alphatims preprocessing to hdf
Technical details
see spectrum_io v0.4.2 in the submodule "d". Alphatims used fro conversion and reading of bruker d / hdf files, then part of the mgf_filter repository is used to sum up peaks.
PR Checklist
docsis updatedDescription of changes
Adds support to directly provide d / hdf files for timsTOF data. Removed pickle in favour of alphatims preprocessing to hdf
Technical details
see spectrum_io v0.4.2 in the submodule "d". Alphatims used fro conversion and reading of bruker d / hdf files, then part of the mgf_filter repository is used to sum up peaks.
Additional context