wilkelab / Opfi

A Python package for discovery, annotation, and analysis of gene clusters in genomics or metagenomics data sets.
https://opfi.readthedocs.io/
MIT License
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Nicer summary API #175

Closed jimrybarski closed 3 years ago

jimrybarski commented 3 years ago

It wasn't obvious to me how to get a reannotation summary despite me having written the module. I've refactored it so there's only one public function and it just takes lists of Operons, and I also added a function to load gzipped gene_finder CSVs since that's how the operons I'm using in this process are stored.