Closed Thomieh73 closed 2 years ago
Hi, I tend to install software via conda environments, to keep my system clean and that is also how I did this installation on my macbook. Maybe you can use it.
I therefore had a workaround to install opfi.
I set-up a conda environment.
conda create -n opfi conda activate opfi
Then I install the dependencies via conda.
conda install -c bioconda blast=2.12.2 conda install -c bioconda diamond=2.0.11 mmseqs2=13.45111 piler-cr=1.06 genericrepeatfinder=1.0 conda install -c anaconda python
Then install opfi with pip3
pip3 install opfi
Then I ran the tutorial to test the installation.
Hi, I tend to install software via conda environments, to keep my system clean and that is also how I did this installation on my macbook. Maybe you can use it.
I therefore had a workaround to install opfi.
I set-up a conda environment.
Then I install the dependencies via conda.
Then install opfi with pip3
Then I ran the tutorial to test the installation.