This module provides tools to analyze output from the CRISPR-transposon pipeline and identify promising candidate systems. Note that this adds an additional dependency on the hypothesis library to support a property-based test.
Sample scripts with usage are provided in the README in the operon_analyzer subdirectory. Some things remain to be done, most notably filtering junk features from operons that might interfere with analysis. And of course, actually trying it out on real-world data.
This module provides tools to analyze output from the CRISPR-transposon pipeline and identify promising candidate systems. Note that this adds an additional dependency on the
hypothesislibrary to support a property-based test.Sample scripts with usage are provided in the README in the
operon_analyzersubdirectory. Some things remain to be done, most notably filtering junk features from operons that might interfere with analysis. And of course, actually trying it out on real-world data.