Operon analyzer should handle output from multiple pipeline CSVs gracefully

wilkelab / Opfi

A Python package for discovery, annotation, and analysis of gene clusters in genomics or metagenomics data sets.

https://opfi.readthedocs.io/

MIT License

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Operon analyzer should handle output from multiple pipeline CSVs gracefully #37

Closed jimrybarski closed 4 years ago

jimrybarski commented 4 years ago

It would be convenient to concatenate all the pipeline results and pipe them into stdin and then have analyze() read from that. However, operon analyzer currently assumes it's only handling a single CSV at a time and just skips the very first line, assuming that's the only CSV header.