pick between overlapping genes by alignment score

wilkelab / Opfi

A Python package for discovery, annotation, and analysis of gene clusters in genomics or metagenomics data sets.

https://opfi.readthedocs.io/

MIT License

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pick between overlapping genes by alignment score #43

Closed jimrybarski closed 4 years ago

jimrybarski commented 4 years ago

If two BLAST hits are contained by the same ORF, we should pick the one with the highest bit score. It probably makes sense to implement this as a Filter.