Mark location of unannotated ORFs in the operon

wilkelab / Opfi

A Python package for discovery, annotation, and analysis of gene clusters in genomics or metagenomics data sets.

https://opfi.readthedocs.io/

MIT License

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Mark location of unannotated ORFs in the operon #45

Closed jimrybarski closed 3 years ago

jimrybarski commented 4 years ago

We should optionally show unknown ORFs (maybe of a given minimum size?) in the visualization. It would probably be preferable to not label them since it would get crowded pretty quickly (or this should be optional too).

This issue first requires us to add some functionality to the pipeline that saves the locations of the unknown ORFs.

jimrybarski commented 3 years ago

We never ended up needing this, not worth pursuing.