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wilkelab / Opfi

A Python package for discovery, annotation, and analysis of gene clusters in genomics or metagenomics data sets.
https://opfi.readthedocs.io/
MIT License
21 stars 5 forks source link

Complete test coverage for operon analyzer #81

Closed jimrybarski closed 4 years ago

jimrybarski commented 4 years ago

Only one line in visualize.py is untested but it is trivial and difficult to test so I'm ignoring it. The untested rule is being handled in another issue.

src/operon_analyzer/__init__.py        0      0   100%
src/operon_analyzer/analyze.py        32      0   100%
src/operon_analyzer/genes.py          55      0   100%
src/operon_analyzer/overview.py       30      0   100%
src/operon_analyzer/parse.py          49      0   100%
src/operon_analyzer/rules.py         186     10    95%   233-241, 349-355
src/operon_analyzer/visualize.py      60      1    98%   93