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wilkelab / cinful

A fully automated pipeline to identify microcins along with their associated immunity proteins and export machinery
GNU General Public License v3.0
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nonredundant_prodigal sample unit test #33

Closed tijeco closed 3 years ago

tijeco commented 3 years ago

this rule requires SAMPLES to be defined, but if you don't have ".fna" files, it is empty. This can be overcome by setting SAMPLES to conditionally be set to ".faa" if it's empty.

There may be a better/thoughtful/smarter way of going about this, but this is the best I can think of now.