Write script to compile features, expression and genotypes into an annotated dataset

willgdjones / HistoVAE

This repository contains work towards HistoVAE: creating meaningful representations of Histopathology images using Variational Autoencoders.

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Write script to compile features, expression and genotypes into an annotated dataset #9

Open willgdjones opened 6 years ago

willgdjones commented 6 years ago

With respect to a model ID and dataset, this would compile and aggregate features for this model, generating them if they do not already exist. It would also organise them into matrices so that downstream analysis can be easily performed, which correspond in a straightforward manner to sample expression data and patient genotype data.