Problems with install [Makefile:51: ibis] Error 1

[nalbright]

I keep having an error message pop up when trying to run make. First I cloned the repo as per readme git clone --recurse-submodules https://github.com/williamslab/ibis.git

Then I cd'ed into ibis/ and ran make Below is the following error message. Are there required dependencies/packages that I could be missing?

Thanks in advance for your help -Nicolette

Onscreen message:

g++ -MMD -std=c++2a -I. -Wall -fopenmp -mpopcnt -O3 -o IBIS.o -c IBIS.cc g++ -MMD -std=c++2a -I. -Wall -fopenmp -mpopcnt -O3 -o genetio/personio.o -c genetio/personio.cc g++ -MMD -std=c++2a -I. -Wall -fopenmp -mpopcnt -O3 -o genetio/marker.o -c genetio/marker.cc g++ -MMD -std=c++2a -I. -Wall -fopenmp -mpopcnt -O3 -o genetio/superperson.o -c genetio/superperson.cc g++ -MMD -std=c++2a -I. -Wall -fopenmp -mpopcnt -O3 -o genetio/personloopdata.o -c genetio/personloopdata.cc g++ -MMD -std=c++2a -I. -Wall -fopenmp -mpopcnt -O3 -o genetio/personbulk.o -c genetio/personbulk.cc g++ -MMD -std=c++2a -I. -Wall -fopenmp -mpopcnt -O3 -o genetio/nuclearfamily.o -c genetio/nuclearfamily.cc g++ -MMD -std=c++2a -I. -Wall -fopenmp -mpopcnt -O3 -o genetio/util.o -c genetio/util.cc g++ -o ibis IBIS.o genetio/personio.o genetio/marker.o genetio/superperson.o genetio/personloopdata.o genetio/personbulk.o genetio/nuclearfamily.o genetio/util.o -I. -Wall -fopenmp -mpopcnt -O3 -lz

/bin/../lib/gcc/x86_64-conda-linux-gnu/11.2.0/../../../../x86_64-conda-linux-gnu/bin/ld: cannot find -lz: No such file or directory collect2: error: ld returned 1 exit status make: *** [Makefile:51: ibis] Error 1

[DanielSeidman]

The -lz issue implies it is unable to find a libz library. I think it's libz.a specifically?

[williamslab]

Can you confirm that installing libz resolves this?

[williamslab]

I'll close this for now, but please let us know if we can help.