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willisbillis
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MAPseq
This repository provides an end-to-end open source pipeline for the processing of MAPseq (Marker Assisted Programming sequencing) data.
BSD 3-Clause "New" or "Revised" License
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Merge dependencies_update into main
#72
github-actions[bot]
closed
1 day ago
0
Merge dependencies_update into main
#71
github-actions[bot]
closed
1 week ago
0
Merge dev updates into main
#70
willisbillis
closed
1 week ago
1
Documentation for fqs sequenced on NextSeq 2000
#69
willisbillis
opened
1 week ago
0
Split ASAP and ATAC fqs
#68
willisbillis
opened
1 week ago
0
Multiple fastq directories
#67
willisbillis
opened
1 week ago
0
Merge dependencies_update into main
#66
github-actions[bot]
closed
3 weeks ago
0
Merge dependencies_update into main
#65
github-actions[bot]
closed
4 weeks ago
0
Merge dependencies_update into main
#64
github-actions[bot]
closed
1 month ago
0
Merge dependencies_update into main
#63
github-actions[bot]
closed
1 month ago
0
Merge dependencies_update into main
#62
github-actions[bot]
closed
1 month ago
0
Merge dependencies_update into main
#61
github-actions[bot]
closed
2 months ago
0
Merge dependencies_update into main
#60
github-actions[bot]
closed
2 months ago
0
Merge dependencies_update into main
#59
github-actions[bot]
closed
2 months ago
0
Merge dependencies_update into main
#58
github-actions[bot]
closed
2 months ago
0
Merge dependencies_update into main
#57
github-actions[bot]
closed
2 months ago
0
Merge dependencies_update into main
#56
github-actions[bot]
closed
2 months ago
0
Dev
#55
willisbillis
closed
3 months ago
0
Merge dependencies_update into main
#54
github-actions[bot]
closed
3 months ago
0
Merge dependencies_update into main
#53
github-actions[bot]
closed
3 months ago
0
Merge dependencies_update into main
#52
github-actions[bot]
closed
3 months ago
0
Merge dependencies_update into main
#51
github-actions[bot]
closed
3 months ago
0
Merge dependencies_update into main
#50
github-actions[bot]
closed
3 months ago
0
Dev
#49
willisbillis
closed
3 months ago
0
add one faq
#48
willisbillis
closed
4 months ago
0
bump idna for security
#47
willisbillis
closed
4 months ago
0
Dev
#46
willisbillis
closed
4 months ago
0
update dev with logo
#45
willisbillis
closed
4 months ago
0
Dev
#44
willisbillis
closed
4 months ago
0
Bump anyio from 3.7.1 to 4.3.0
#43
dependabot[bot]
closed
5 months ago
0
Bump tables from 3.7.0 to 3.9.2
#42
dependabot[bot]
closed
5 months ago
0
Dev
#41
willisbillis
closed
5 months ago
0
Bump numpy from 1.22.0 to 1.26.4
#40
dependabot[bot]
closed
5 months ago
0
Bump numexpr from 2.8.6 to 2.10.0
#39
dependabot[bot]
closed
5 months ago
0
Bump ipykernel from 6.16.2 to 6.29.4
#38
dependabot[bot]
closed
5 months ago
0
Dev cellranger v8 compat
#37
willisbillis
closed
5 months ago
0
Bump pillow from 10.2.0 to 10.3.0
#36
dependabot[bot]
closed
5 months ago
0
Bump numpy from 1.21.6 to 1.22.0
#35
dependabot[bot]
closed
5 months ago
0
Bump ipython from 7.34.0 to 8.10.0
#34
dependabot[bot]
closed
5 months ago
0
Bump scipy from 1.7.3 to 1.11.1
#33
dependabot[bot]
closed
5 months ago
0
Bump jupyter-server from 1.24.0 to 2.11.2
#32
dependabot[bot]
closed
5 months ago
0
Bump pillow from 9.5.0 to 10.2.0
#31
dependabot[bot]
closed
5 months ago
0
Bump fonttools from 4.38.0 to 4.43.0
#30
dependabot[bot]
closed
5 months ago
0
Bump tornado from 6.2 to 6.3.3
#29
dependabot[bot]
closed
5 months ago
0
Dev
#28
willisbillis
closed
5 months ago
0
Add citation info
#27
willisbillis
closed
5 months ago
0
Merged dev to main
#26
willisbillis
closed
5 months ago
0
compile ATAC best practices
#25
willisbillis
closed
5 months ago
1
update MISC phase2 ATAC script to meet best practices
#24
willisbillis
opened
5 months ago
0
update ACV02 phase2 ATAC script to meet best practices
#23
willisbillis
opened
5 months ago
0
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