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wjh892521292 / LKM-UNet

Large Kernel Vision Mamba UNet for Medical Image Segmentation
https://arxiv.org/abs/2403.07332
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NiftiImageIO #2

Open Tammytcl opened 3 months ago

Tammytcl commented 3 months ago

WARNING: In /tmp/SimpleITK-build/ITK/Modules/IO/NIFTI/src/itkNiftiImageIO.cxx, line 1934 NiftiImageIO (0x46dded0): /mnt/d/Desktop/paper/LMa-UNet-main/data/nnUNet_raw/Dataset027_ACDC/imagesTr/patient099_frame09_0000.nii.gz has unexpected scales in sform

WARNING: In /tmp/SimpleITK-build/ITK/Modules/IO/NIFTI/src/itkNiftiImageIO.cxx, line 1934 NiftiImageIO (0x56d8620): /mnt/d/Desktop/paper/LMa-UNet-main/data/nnUNet_raw/Dataset027_ACDC/labelsTr/patient098_frame01.nii.gz has unexpected scales in sform

WARNING: In /tmp/SimpleITK-build/ITK/Modules/IO/NIFTI/src/itkNiftiImageIO.cxx, line 1934 NiftiImageIO (0x5906f10): /mnt/d/Desktop/paper/LMa-UNet-main/data/nnUNet_raw/Dataset027_ACDC/labelsTr/patient098_frame09.nii.gz has unexpected scales in sform

97%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████▌ | 194/200 [00:36<00:00, 8.78it/s]WARNING: In /tmp/SimpleITK-build/ITK/Modules/IO/NIFTI/src/itkNiftiImageIO.cxx, line 1934 NiftiImageIO (0x56d8620): /mnt/d/Desktop/paper/LMa-UNet-main/data/nnUNet_raw/Dataset027_ACDC/labelsTr/patient098_frame01.nii.gz has unexpected scales in sform

WARNING: In /tmp/SimpleITK-build/ITK/Modules/IO/NIFTI/src/itkNiftiImageIO.cxx, line 1934 NiftiImageIO (0x5906f10): /mnt/d/Desktop/paper/LMa-UNet-main/data/nnUNet_raw/Dataset027_ACDC/labelsTr/patient098_frame09.nii.gz has unexpected scales in sform

WARNING: In /tmp/SimpleITK-build/ITK/Modules/IO/NIFTI/src/itkNiftiImageIO.cxx, line 1934 NiftiImageIO (0x4221590): /mnt/d/Desktop/paper/LMa-UNet-main/data/nnUNet_raw/Dataset027_ACDC/labelsTr/patient099_frame09.nii.gz has unexpected scales in sform

WARNING: In /tmp/SimpleITK-build/ITK/Modules/IO/NIFTI/src/itkNiftiImageIO.cxx, line 1934 NiftiImageIO (0x50532e0): /mnt/d/Desktop/paper/LMa-UNet-main/data/nnUNet_raw/Dataset027_ACDC/labelsTr/patient099_frame01.nii.gz has unexpected scales in sform

WARNING: In /tmp/SimpleITK-build/ITK/Modules/IO/NIFTI/src/itkNiftiImageIO.cxx, line 1934 NiftiImageIO (0x50532e0): /mnt/d/Desktop/paper/LMa-UNet-main/data/nnUNet_raw/Dataset027_ACDC/labelsTr/patient099_frame01.nii.gz has unexpected scales in sform

WARNING: In /tmp/SimpleITK-build/ITK/Modules/IO/NIFTI/src/itkNiftiImageIO.cxx, line 1934 NiftiImageIO (0x4221590): /mnt/d/Desktop/paper/LMa-UNet-main/data/nnUNet_raw/Dataset027_ACDC/labelsTr/patient099_frame09.nii.gz has unexpected scales in sform

WARNING: In /tmp/SimpleITK-build/ITK/Modules/IO/NIFTI/src/itkNiftiImageIO.cxx, line 1934 NiftiImageIO (0x5dc3840): /mnt/d/Desktop/paper/LMa-UNet-main/data/nnUNet_raw/Dataset027_ACDC/imagesTr/patient100_frame01_0000.nii.gz has unexpected scales in sform

WARNING: In /tmp/SimpleITK-build/ITK/Modules/IO/NIFTI/src/itkNiftiImageIO.cxx, line 1934 NiftiImageIO (0x5b94f60): /mnt/d/Desktop/paper/LMa-UNet-main/data/nnUNet_raw/Dataset027_ACDC/imagesTr/patient100_frame13_0000.nii.gz has unexpected scales in sform

98%|█████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████▍ | 196/200 [00:36<00:00, 7.20it/s]WARNING: In /tmp/SimpleITK-build/ITK/Modules/IO/NIFTI/src/itkNiftiImageIO.cxx, line 1934 NiftiImageIO (0x5dc3840): /mnt/d/Desktop/paper/LMa-UNet-main/data/nnUNet_raw/Dataset027_ACDC/imagesTr/patient100_frame01_0000.nii.gz has unexpected scales in sform

WARNING: In /tmp/SimpleITK-build/ITK/Modules/IO/NIFTI/src/itkNiftiImageIO.cxx, line 1934 NiftiImageIO (0x5b94f60): /mnt/d/Desktop/paper/LMa-UNet-main/data/nnUNet_raw/Dataset027_ACDC/imagesTr/patient100_frame13_0000.nii.gz has unexpected scales in sform

WARNING: In /tmp/SimpleITK-build/ITK/Modules/IO/NIFTI/src/itkNiftiImageIO.cxx, line 1934 NiftiImageIO (0x56d8620): /mnt/d/Desktop/paper/LMa-UNet-main/data/nnUNet_raw/Dataset027_ACDC/labelsTr/patient100_frame13.nii.gz has unexpected scales in sform

WARNING: In /tmp/SimpleITK-build/ITK/Modules/IO/NIFTI/src/itkNiftiImageIO.cxx, line 1934 NiftiImageIO (0x5906f10): /mnt/d/Desktop/paper/LMa-UNet-main/data/nnUNet_raw/Dataset027_ACDC/labelsTr/patient100_frame01.nii.gz has unexpected scales in sform

99%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████▏ | 198/200 [00:37<00:00, 8.85it/s]WARNING: In /tmp/SimpleITK-build/ITK/Modules/IO/NIFTI/src/itkNiftiImageIO.cxx, line 1934 NiftiImageIO (0x56d8620): /mnt/d/Desktop/paper/LMa-UNet-main/data/nnUNet_raw/Dataset027_ACDC/labelsTr/patient100_frame13.nii.gz has unexpected scales in sform

WARNING: In /tmp/SimpleITK-build/ITK/Modules/IO/NIFTI/src/itkNiftiImageIO.cxx, line 1934 NiftiImageIO (0x5906f10): /mnt/d/Desktop/paper/LMa-UNet-main/data/nnUNet_raw/Dataset027_ACDC/labelsTr/patient100_frame01.nii.gz has unexpected scales in sform

100%|█████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 200/200 [00:37<00:00, 5.31it/s] Configuration: 3d_lowres... INFO: Configuration 3d_lowres not found in plans file nnUNetPlans.json of dataset Dataset027_ACDC. Skipping.

i used the ACDC dataset ，want to know why come to this

wenzheng00 commented 1 month ago

WARNING: In /tmp/SimpleITK-build/ITK/Modules/IO/NIFTI/src/itkNiftiImageIO.cxx, line 1934 NiftiImageIO (0x46dded0): /mnt/d/Desktop/paper/LMa-UNet-main/data/nnUNet_raw/Dataset027_ACDC/imagesTr/patient099_frame09_0000.nii.gz has unexpected scales in sform

WARNING: In /tmp/SimpleITK-build/ITK/Modules/IO/NIFTI/src/itkNiftiImageIO.cxx, line 1934 NiftiImageIO (0x56d8620): /mnt/d/Desktop/paper/LMa-UNet-main/data/nnUNet_raw/Dataset027_ACDC/labelsTr/patient098_frame01.nii.gz has unexpected scales in sform

WARNING: In /tmp/SimpleITK-build/ITK/Modules/IO/NIFTI/src/itkNiftiImageIO.cxx, line 1934 NiftiImageIO (0x5906f10): /mnt/d/Desktop/paper/LMa-UNet-main/data/nnUNet_raw/Dataset027_ACDC/labelsTr/patient098_frame09.nii.gz has unexpected scales in sform

97%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████▌ | 194/200 [00:36<00:00, 8.78it/s]WARNING: In /tmp/SimpleITK-build/ITK/Modules/IO/NIFTI/src/itkNiftiImageIO.cxx, line 1934 NiftiImageIO (0x56d8620): /mnt/d/Desktop/paper/LMa-UNet-main/data/nnUNet_raw/Dataset027_ACDC/labelsTr/patient098_frame01.nii.gz has unexpected scales in sform

WARNING: In /tmp/SimpleITK-build/ITK/Modules/IO/NIFTI/src/itkNiftiImageIO.cxx, line 1934 NiftiImageIO (0x5906f10): /mnt/d/Desktop/paper/LMa-UNet-main/data/nnUNet_raw/Dataset027_ACDC/labelsTr/patient098_frame09.nii.gz has unexpected scales in sform

WARNING: In /tmp/SimpleITK-build/ITK/Modules/IO/NIFTI/src/itkNiftiImageIO.cxx, line 1934 NiftiImageIO (0x4221590): /mnt/d/Desktop/paper/LMa-UNet-main/data/nnUNet_raw/Dataset027_ACDC/labelsTr/patient099_frame09.nii.gz has unexpected scales in sform

WARNING: In /tmp/SimpleITK-build/ITK/Modules/IO/NIFTI/src/itkNiftiImageIO.cxx, line 1934 NiftiImageIO (0x50532e0): /mnt/d/Desktop/paper/LMa-UNet-main/data/nnUNet_raw/Dataset027_ACDC/labelsTr/patient099_frame01.nii.gz has unexpected scales in sform

WARNING: In /tmp/SimpleITK-build/ITK/Modules/IO/NIFTI/src/itkNiftiImageIO.cxx, line 1934 NiftiImageIO (0x50532e0): /mnt/d/Desktop/paper/LMa-UNet-main/data/nnUNet_raw/Dataset027_ACDC/labelsTr/patient099_frame01.nii.gz has unexpected scales in sform

WARNING: In /tmp/SimpleITK-build/ITK/Modules/IO/NIFTI/src/itkNiftiImageIO.cxx, line 1934 NiftiImageIO (0x4221590): /mnt/d/Desktop/paper/LMa-UNet-main/data/nnUNet_raw/Dataset027_ACDC/labelsTr/patient099_frame09.nii.gz has unexpected scales in sform

WARNING: In /tmp/SimpleITK-build/ITK/Modules/IO/NIFTI/src/itkNiftiImageIO.cxx, line 1934 NiftiImageIO (0x5dc3840): /mnt/d/Desktop/paper/LMa-UNet-main/data/nnUNet_raw/Dataset027_ACDC/imagesTr/patient100_frame01_0000.nii.gz has unexpected scales in sform

WARNING: In /tmp/SimpleITK-build/ITK/Modules/IO/NIFTI/src/itkNiftiImageIO.cxx, line 1934 NiftiImageIO (0x5b94f60): /mnt/d/Desktop/paper/LMa-UNet-main/data/nnUNet_raw/Dataset027_ACDC/imagesTr/patient100_frame13_0000.nii.gz has unexpected scales in sform

98%|█████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████▍ | 196/200 [00:36<00:00, 7.20it/s]WARNING: In /tmp/SimpleITK-build/ITK/Modules/IO/NIFTI/src/itkNiftiImageIO.cxx, line 1934 NiftiImageIO (0x5dc3840): /mnt/d/Desktop/paper/LMa-UNet-main/data/nnUNet_raw/Dataset027_ACDC/imagesTr/patient100_frame01_0000.nii.gz has unexpected scales in sform

WARNING: In /tmp/SimpleITK-build/ITK/Modules/IO/NIFTI/src/itkNiftiImageIO.cxx, line 1934 NiftiImageIO (0x5b94f60): /mnt/d/Desktop/paper/LMa-UNet-main/data/nnUNet_raw/Dataset027_ACDC/imagesTr/patient100_frame13_0000.nii.gz has unexpected scales in sform

WARNING: In /tmp/SimpleITK-build/ITK/Modules/IO/NIFTI/src/itkNiftiImageIO.cxx, line 1934 NiftiImageIO (0x56d8620): /mnt/d/Desktop/paper/LMa-UNet-main/data/nnUNet_raw/Dataset027_ACDC/labelsTr/patient100_frame13.nii.gz has unexpected scales in sform

WARNING: In /tmp/SimpleITK-build/ITK/Modules/IO/NIFTI/src/itkNiftiImageIO.cxx, line 1934 NiftiImageIO (0x5906f10): /mnt/d/Desktop/paper/LMa-UNet-main/data/nnUNet_raw/Dataset027_ACDC/labelsTr/patient100_frame01.nii.gz has unexpected scales in sform

99%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████▏ | 198/200 [00:37<00:00, 8.85it/s]WARNING: In /tmp/SimpleITK-build/ITK/Modules/IO/NIFTI/src/itkNiftiImageIO.cxx, line 1934 NiftiImageIO (0x56d8620): /mnt/d/Desktop/paper/LMa-UNet-main/data/nnUNet_raw/Dataset027_ACDC/labelsTr/patient100_frame13.nii.gz has unexpected scales in sform

WARNING: In /tmp/SimpleITK-build/ITK/Modules/IO/NIFTI/src/itkNiftiImageIO.cxx, line 1934 NiftiImageIO (0x5906f10): /mnt/d/Desktop/paper/LMa-UNet-main/data/nnUNet_raw/Dataset027_ACDC/labelsTr/patient100_frame01.nii.gz has unexpected scales in sform

100%|█████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 200/200 [00:37<00:00, 5.31it/s] Configuration: 3d_lowres... INFO: Configuration 3d_lowres not found in plans file nnUNetPlans.json of dataset Dataset027_ACDC. Skipping.

i used the ACDC dataset ，want to know why come to this

我也出现这个问题了，请问您解决了吗