Todo

[wolfiex]

• [x] change begin and ropatool to executables
• [x] mechanism duplicates
• [x] colour code error messages
• [x] check of outputs folder exists before execution
• [x] Makefile - check if ifort present, else use gfortran compiler settings. (something to do with tuv herre too)
• [x] DEFIX variables not read by util by default... fix these (for geoschem)
• [x] subset generator - multiprocess symbolic simplification
• [x] Mech compare plot function in dsmacc library
• [x] Rename sim_data class to something more intuitive.
• [x] PDF in class not actually showing percentage (times by 100) - also floor this
• [x] mechcomp not sorted by name
• [x] ics view- remake- to latex
• [x] continue model from last ics + optional merge of netcdfs.
• [x] checker if model failed, do not make an nc file...
• [x] constrain to observation
• [ ] parallel omp of constrain etc.
• [x] rm filter *0EXP(0/TEMP)) from mcm
• [ ] set kpp paths from install/make (export env)
• [x] fitobs general for all cases
• [ ] Check if interactive, is so load file / check results print w/h option. (Maybe use pdb trace)
• [x] OBS switch within ICS - triggers which command to run with in mpi script
• [x] MECHLUMP comments too long for kpp
• [ ] Check for LON and LAT within range.
• [x] Adjust ICS with local time to match percentage of jday
• [ ] testscript to preload modules on install
• [ ] run to check if model has been made.

[pb866]

• [ ] Create links back to Main README in the various sub-files
• [x] R needs concentration = rfix in util: 1/cfactor not just 1 , or move this after fix multiplier
• [x] Fix problems with Makefile defns Provide a list with necessary bashrc settings on earth0, e.g. to compile kpp with icc
• [x] No 'M' species in dsmacc library (.M is already defined, failing that it is also located in .params)