workflow4metabolomics lcmsmatching issues

workflow4metabolomics / lcmsmatching

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Doesn't work with more recent versions of `biodb`

#68 elliotfontaine opened 4 months ago
7
New tool for listing chrom cols

#67 pkrog opened 4 years ago
0
Correct publish targets

#66 pkrog closed 5 years ago
0
Fix issue with NA values in input

#65 pkrog closed 5 years ago
0
Remove spaces inside some of XML fields

#64 pkrog opened 5 years ago
0
Correct M/Z tolerance unit in XML.

#63 pkrog closed 5 years ago
0
Update readme

#62 pkrog closed 5 years ago
0
Publish on toolshed

#61 pkrog closed 5 years ago
1
Replace filedb example in help (XML) with extract from Massbank.

#60 pkrog opened 5 years ago
0
Release/4.0 update xml

#59 pkrog closed 5 years ago
0
Integrate PeakForest compound information

#58 pkrog closed 5 years ago
1
Update README

#57 pkrog closed 5 years ago
1
Make planemo tests pass

#56 pkrog closed 5 years ago
1
Add r-biodb to bioconda recipes

#55 pkrog closed 5 years ago
0
Refact/remove deprecated code

#54 pkrog closed 5 years ago
0
Testing/travis planemo tests correction

#53 pkrog closed 5 years ago
0
Refact/switch to biodb and remove old scheme

#52 pkrog closed 5 years ago
0
Conda dependency seemingly installed but failed to build job environment

#51 nirshahaf opened 6 years ago
3
Add missing HTML ref files.

#50 pkrog closed 6 years ago
0
Hotfix/4.0/rt matching

#49 pkrog closed 6 years ago
0
Use text fields for in-house database column names

#48 pkrog closed 5 years ago
1
List chrom cols tool

#47 pkrog opened 6 years ago
1
No more dynamic fields in XML

#46 pkrog closed 5 years ago
1
Develop precursor match for biodb version

#45 pkrog closed 6 years ago
2
Implement needed methods into MsBioDb

#44 pkrog closed 6 years ago
1
Remove useless methods

#43 pkrog closed 5 years ago
1
Local continuous integration

#42 pkrog closed 5 years ago
1
updated conda package versions

#41 bernt-matthias closed 6 years ago
0
Refact/makefile

#40 pkrog closed 7 years ago
0
NA values in M/Z column of input files give multiple matches with NA spectra

#39 pkrog closed 5 years ago
1
speed up HTML writing

#38 pkrog opened 7 years ago
0
Add a NA value for pos mode or neg mode

#37 pkrog closed 5 years ago
3
Output an information file

#36 pkrog opened 7 years ago
2
Append columns

#35 pkrog closed 5 years ago
1
Reenable XLS datatabase

#34 pkrog closed 5 years ago
1
Remove ant

#33 pkrog closed 7 years ago
1
Planemo test failing

#32 pkrog closed 5 years ago
1
Improve Peakforest mz/rt matching speed

#31 pkrog closed 5 years ago
1
Improve Peakforest mz matching speed

#30 pkrog closed 5 years ago
1
Improve launch of search-mz script

#29 pkrog closed 5 years ago
1
Move all searchmz tests into test-searchmz

#28 pkrog closed 5 years ago
1
Correct Travis tests

#27 pkrog closed 7 years ago
1
Rename properly the database field tags

#26 pkrog closed 5 years ago
1
Write tests for new python scripts

#25 pkrog closed 5 years ago
1
Create HTML output class

#24 pkrog closed 5 years ago
1
Remove customisation of output column names

#23 pkrog closed 7 years ago
1
Matching de deux variables en même temps

#22 pkrog opened 7 years ago
0
Add examples to help page

#21 pkrog closed 7 years ago
1
Try to improve help page

#20 pkrog closed 7 years ago
1
In tool page, present in-house database column names as separate text fields

#19 pkrog closed 7 years ago
2