Import failure of https://raw.githubusercontent.com/Athanaseus/2gc-pipeline/master/selfcal_simulation.cwl

workflux / workflUX

An open-source, cloud-ready web application for simplified deployment of big data workflows.

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Import failure of https://raw.githubusercontent.com/Athanaseus/2gc-pipeline/master/selfcal_simulation.cwl #40

Open KerstenBreuer opened 4 years ago

KerstenBreuer commented 4 years ago

The workflow https://raw.githubusercontent.com/Athanaseus/2gc-pipeline/master/selfcal_simulation.cwl fails validation after packing.

Reported at common-workflow-language/cwltool#1241.

Edit: sorry wrong issue reference. Now it's correct.

KerstenBreuer commented 4 years ago

Hi @Athanaseus,

unfortunately this is another error, that is distinct from common-workflow-language/cwltool#1238.

I've reported it and waiting for a fix (see above).

Obviously, your workflow uses so many cutting edge features of CWL that cwltool is a bit overwhelmed 😄

Athanaseus commented 4 years ago

Thanks @KerstenBreuer, looks like this was resolved on cwltool right? How do I now retest? I managed to install the master branches of both cwltool & cwlab, but getting the same behaviour.

KerstenBreuer commented 4 years ago

Hi @Athanaseus,

actually the common-workflow-language/cwltool#1241 is still open.

But once that issue is solved, you can indeed proceed by installing the master branches of both.

Best wishes, Kersten

Athanaseus commented 4 years ago

Kool, I will do exactly that. Thank you @KerstenBreuer