wrpearson
commented
2 years ago This is a very interesting problem. Can I confirm that this is the command that is being run from a command line? Not through some web interface?
I cannot imagine why the query file name is being modified. What I can confirm is that when I run the program with two files with those names, everything works fine.
And the current version of fasta/glsearch is 36.3.8i Sept 2021.
Bill Pearson
Begin forwarded message:
From: sbaheti84 @.**@.>>
Subject: [wrpearson/fasta36] can't open library issue (Issue #42)
Date: March 1, 2022 at 12:11:15 AM EST
To: wrpearson/fasta36 @.**@.>>
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Reply-To: wrpearson/fasta36 @.**@.>>
Hi
I am getting an error while using the tool. My argument is different then what is reported as missing library. gls_seq20220228-289684-12njx was never asked in the command, not sure how it is picking that
Need help to investigate this
fasta36-36.3.8d_13Apr16/bin/glsearch36 -s mydna.mat -g0 -f20 gls_seq20220228-289684-12njcwk gls_ref20220228-289684-1xce2p6
fasta36-36.3.8d_13Apr16/bin/glsearch36 -s mydna.mat -g0 -f20 gls_seq20220228-289684-12njcwk gls_ref20220228-289684-1xce2p6
GLSEARCH performs a global-query/local-library search version 36.3.8d Apr, 2016(preload9)
[fasta36-36.3.8d_13Apr16/bin/glsearch36] cannot open library gls_seq20220228-289684-12njx
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sbaheti84
Hi
I am getting an error while using the tool. My argument is different then what is reported as missing library. gls_seq20220228-289684-12njx was never asked in the command, not sure how it is picking that
Need help to investigate this
fasta36-36.3.8d_13Apr16/bin/glsearch36 -s mydna.mat -g0 -f20 gls_seq20220228-289684-12njcwk gls_ref20220228-289684-1xce2p6
fasta36-36.3.8d_13Apr16/bin/glsearch36 -s mydna.mat -g0 -f20 gls_seq20220228-289684-12njcwk gls_ref20220228-289684-1xce2p6
GLSEARCH performs a global-query/local-library search version 36.3.8d Apr, 2016(preload9)
[fasta36-36.3.8d_13Apr16/bin/glsearch36] cannot open library gls_seq20220228-289684-12njx