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wslh-bio / SPNtypeID

SPNtypeID is a Nextflow pipeline used for genome assembly and serotyping of Streptococcus pneumoniae.
GNU General Public License v3.0
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Check for empty reads in Kraken module #10

Open AbigailShockey opened 6 months ago

AbigailShockey commented 6 months ago

Description of feature

Add logic to check for empty fastq files (zero reads) in Kraken module (likely using zcat)