search

wtclarke / fsl_mrs

Mirror of the FSL-MRS gitlab repository
https://git.fmrib.ox.ac.uk/fsl/fsl_mrs
Other
14 stars 8 forks source link

vtk related error when installatin FSL 6.0.6 on Ubuntu 22.04 #26

Closed KTTrev closed 3 months ago

KTTrev commented 3 months ago

When installing FSL version 6.0.6 as recommended here, I get vtk related error. When I inspect the log file fsl_installation_20240416151633.log, I can see the following:

15:16:30 fslinstaller.py:1084: [stderr]: - package fsl-mist-2111.3-h63745ec_1 requires vtk >=9.1.0,<9.2.0a0, but none of the providers can be installed 15:16:30 fslinstaller.py:1084: [stderr]: │ └─ vtk >=9.1.0,<9.2.0a0 with the potential options 15:16:30 fslinstaller.py:1084: [stderr]: │ ├─ vtk 9.1.0 would require 15:16:30 fslinstaller.py:1084: [stderr]: │ ├─ vtk 9.1.0 would require 15:16:30 fslinstaller.py:1084: [stderr]: │ ├─ vtk 9.1.0 would require 15:16:30 fslinstaller.py:1084: [stderr]: │ └─ vtk 9.1.0 would require

But when try to downgrade my installed vtk version from 9.3.0 to 9.1.0, Python says that it "Could not find a version that satisfies the requirement vtk==9.1 (from versions: 9.2.2, 9.2.4, 9.2.5, 9.2.6, 9.3.0rc1, 9.3.0rc2, 9.3.0, 9.3.20230807rc0)"

I get the same issue when I try to build a Singularity container with the following recipe https://github.com/MPIB/singularity-fsl/blob/main/Singularity.6.0.6

Is it a bug, or am I doing something wrong?

wtclarke commented 3 months ago

Hi, This is a repo specifically for the FSL-MRS package. You'll get much better help posting your question to the FSL JISC mailing list. FSL@JISCMAIL.AC.UK