wtsi-npg / bambi

Process Illumina instrument data into SAM/BAM/CRAM files.
http://wtsi-npg.github.io/bambi
GNU Affero General Public License v3.0
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[Snyk] Security upgrade debian from bookworm to 12.5 #200

Closed snyk-io[bot] closed 5 months ago

snyk-io[bot] commented 5 months ago

This PR was automatically created by Snyk using the credentials of a real user.


Keeping your Docker base image up-to-date means you’ll benefit from security fixes in the latest version of your chosen image. #### Changes included in this PR - docker/Dockerfile We recommend upgrading to `debian:12.5`, as this image has only 37 known vulnerabilities. To do this, merge this pull request, then verify your application still works as expected. Some of the most important vulnerabilities in your base image include: | Severity | Priority Score / 1000 | Issue | Exploit Maturity | | :------: | :-------------------- | :---- | :--------------- | | ![low severity](https://res.cloudinary.com/snyk/image/upload/w_20,h_20/v1561977819/icon/l.png "low severity") | **436** | CVE-2024-2961
[SNYK-DEBIAN12-GLIBC-6617103](https://snyk.io/vuln/SNYK-DEBIAN12-GLIBC-6617103) | No Known Exploit | | ![low severity](https://res.cloudinary.com/snyk/image/upload/w_20,h_20/v1561977819/icon/l.png "low severity") | **436** | CVE-2024-2961
[SNYK-DEBIAN12-GLIBC-6617103](https://snyk.io/vuln/SNYK-DEBIAN12-GLIBC-6617103) | No Known Exploit | | ![high severity](https://res.cloudinary.com/snyk/image/upload/w_20,h_20/v1561977819/icon/h.png "high severity") | **400** | Allocation of Resources Without Limits or Throttling
[SNYK-DEBIAN12-SYSTEMD-6277507](https://snyk.io/vuln/SNYK-DEBIAN12-SYSTEMD-6277507) | No Known Exploit | | ![high severity](https://res.cloudinary.com/snyk/image/upload/w_20,h_20/v1561977819/icon/h.png "high severity") | **400** | Allocation of Resources Without Limits or Throttling
[SNYK-DEBIAN12-SYSTEMD-6277507](https://snyk.io/vuln/SNYK-DEBIAN12-SYSTEMD-6277507) | No Known Exploit | | ![critical severity](https://res.cloudinary.com/snyk/image/upload/w_20,h_20/v1561977819/icon/c.png "critical severity") | **500** | Integer Overflow or Wraparound
[SNYK-DEBIAN12-ZLIB-6008963](https://snyk.io/vuln/SNYK-DEBIAN12-ZLIB-6008963) | No Known Exploit | --- **Note:** _You are seeing this because you or someone else with access to this repository has authorized Snyk to open fix PRs._ For more information: 🧐 [View latest project report](https://app.snyk.io/org/npg/project/c4dc8249-1ff1-464e-9540-26faa0521d01?utm_source=github-cloud-app&utm_medium=referral&page=fix-pr) 🛠 [Adjust project settings](https://app.snyk.io/org/npg/project/c4dc8249-1ff1-464e-9540-26faa0521d01?utm_source=github-cloud-app&utm_medium=referral&page=fix-pr/settings) [//]: # 'snyk:metadata:{"prId":"044794e0-2882-43a2-b01b-fd87761415c0","prPublicId":"044794e0-2882-43a2-b01b-fd87761415c0","dependencies":[{"name":"debian","from":"bookworm","to":"12.5"}],"packageManager":"dockerfile","projectPublicId":"c4dc8249-1ff1-464e-9540-26faa0521d01","projectUrl":"https://app.snyk.io/org/npg/project/c4dc8249-1ff1-464e-9540-26faa0521d01?utm_source=github-cloud-app&utm_medium=referral&page=fix-pr","type":"auto","patch":[],"vulns":["SNYK-DEBIAN12-ZLIB-6008963","SNYK-DEBIAN12-GLIBC-6617103","SNYK-DEBIAN12-SYSTEMD-6277507"],"upgrade":["SNYK-DEBIAN12-GLIBC-6617103","SNYK-DEBIAN12-GLIBC-6617103","SNYK-DEBIAN12-SYSTEMD-6277507","SNYK-DEBIAN12-SYSTEMD-6277507","SNYK-DEBIAN12-ZLIB-6008963"],"isBreakingChange":false,"env":"prod","prType":"fix","templateVariants":["updated-fix-title","priorityScore"],"priorityScoreList":[500,436,400],"remediationStrategy":"vuln"}' --- **Learn how to fix vulnerabilities with free interactive lessons:** 🦉 [Allocation of Resources Without Limits or Throttling](https://learn.snyk.io/lesson/no-rate-limiting/?loc=fix-pr)
kjsanger commented 5 months ago

This PR is nonsense. debian:12.5 is debian:bookworm. They are two tags on exactly the same image.