qc_db_delete_autoqc doesn't work for QC checks which use id_seq_composition

wtsi-npg / npg_qc

QC checks and metrics for Illumina NGS data

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Closed srl147 closed 7 years ago

srl147 commented 7 years ago

there are two problems with qc_db_delete_autoqc

firstly checks_list function has moved from npg_qc::autoqc::autoqc to npg_qc::autoqc::results::collection

secondly the code assume all the database table have a id_run column, this isn't true for qc checks which use composition i.e.

rna_seqqc, samtools_stats and sequence_summary

mgcam commented 7 years ago