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wtsi-npg / npg_seq_pipeline

Processing and analysis of data coming from Illumina sequencing machines
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ref caching bug #711

Open mgcam opened 2 years ago

mgcam commented 2 years ago

do_target_alignment is evaluated to false when creating the seq_alignment jobs - ref being the study ref on lanes 1 & 2 (run 43607) with mixed sample refs

mgcam commented 2 years ago

Also, see if https://github.com/wtsi-npg/npg_seq_pipeline/issues/540 is related