when validating a run is complete use the actual number of tiles in each lane

wtsi-npg / npg_tracking

WTSI Illumina sequencing instruments (HiSeq, MiSeq, GA) tracking

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when validating a run is complete use the actual number of tiles in each lane #330

Closed srl147 closed 3 years ago

srl147 commented 8 years ago

when validating a run is complete ( see validate_run_complete() in lib/Monitor/RunFolder/Staging.pm ) we check the expected number of tiles are present. The expected number of tiles is assumed to be the same for each lane, this is not the case if some tiles are missing. The number of tiles for a particular lane can be derived from Data/Intensities/config.xml

mgcam commented 3 years ago

This has been implemented, see https://github.com/wtsi-npg/npg_tracking/blob/bcc602d3c51b786b26971869ae4e529c2123586f/lib/npg_tracking/illumina/run/long_info.pm#L381