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wtsi-npg / p4

Process and Pipe Pipeline Panacea
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produce cram index files with samtools #329

Closed dozy closed 8 months ago

dozy commented 10 months ago

change final_output_prep template to produce crai files using "samtools index" rather than "cram_index"

dozy commented 8 months ago

superseded by https://github.com/wtsi-npg/p4/pull/332