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wtsi-npg / samtools_container

Scripts to create a docker container for samtools
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Copying /opt/irods-externals should not be necessary #24

Open kjsanger opened 7 months ago

kjsanger commented 7 months ago

https://github.com/wtsi-npg/samtools_container/blob/7e2aad82bb14243ab1dd12e992fbb8d43114c635/docker/Dockerfile#L124

These are installed as Debian packages so if they are needed in the final image, they will be installed automatically as a dependency when installing the irods-runtime package.

jmtcsngr commented 5 months ago

I think this may have been resolved by https://github.com/wtsi-npg/samtools_container/pull/25