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wu-yc / scMetabolism

Quantifying metabolism activity at the single-cell resolution
BSD 3-Clause "New" or "Revised" License
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Some questions about the applications of scRNAseq to metabolism. #1

Closed xiaozhongshen closed 2 years ago

xiaozhongshen commented 3 years ago

Bro, I want to ask you some technical questions about this package. From my perspective, this package is a combination of ALRA used for imputation of missing values and some tools related to gene signature analysis. I think it is neccessary to provide the database of some other important species, such as mouse and zebrafish. Another problem I am concerned about is the receptor-ligand communication between different cell types. If you can expand this function in the package and elevate the efficiency of computation, I think this package will have a wider application in metabolism.

wu-yc commented 3 years ago

Hi, xiaozhong,

Current version of scMetabolism only supports human. We are still testing mouse scRNA-seq data.

LiMo-bioxer commented 10 months ago

Hi, xiaozhong,

Current version of scMetabolism only supports human. We are still testing mouse scRNA-seq data.

Can we now analyze the mouse data. Thanks a lot

hiraksarkar commented 10 months ago

Same question