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wustl-oncology / analysis-wdls

Scalable genomic analysis pipelines, written in WDL
MIT License
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remove intersect_known_variants and rename filter_known_variants #114

Closed malachig closed 1 year ago

malachig commented 1 year ago

remove intersect_known_variants and rename filter_known_variants to annotate_known_variants

related to https://github.com/wustl-oncology/analysis-wdls/issues/103

malachig commented 1 year ago

I'm testing this PR with a real dataset now.

malachig commented 1 year ago

My test succeeded. In this case I expected no impact whatsoever on variant results. I confirmed that the results are identical with and without this PR applied.