Variant Parameter Cleanup (from PR#110)

wustl-oncology / analysis-wdls

Scalable genomic analysis pipelines, written in WDL

MIT License

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Variant Parameter Cleanup (from PR#110) #136

Closed tmooney closed 10 months ago

tmooney commented 10 months ago

This is a replacement version of #110 updated to resolve conflicts that have crept up since that PR was originally created.

malachig commented 10 months ago

I ran a full test with this PR merged. Without manually adjusting any variant freq cutoffs in my YAML file, the germline and somatic variant calls remain the same.