Add tabix indexed file to output

wustl-oncology / analysis-wdls

Scalable genomic analysis pipelines, written in WDL

MIT License

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Closed malachig closed 1 year ago

malachig commented 1 year ago

We currently keep this final variants file as an output: final_results/annotated.expression.vcf.gz.

We should also keep the tabix index for it.

malachig commented 1 year ago

This is needed if you want to rerun pvacseq on the output of the pipeline.