search

wwiecek / baggr

R package for Bayesian meta-analysis models, using Stan
GNU General Public License v3.0
46 stars 12 forks source link

Pre-compute vignette objects and store them #78

Closed wwiecek closed 1 year ago

wwiecek commented 4 years ago

Currently I run some loocv and logit models with iter=500 but soon even this won't be enough. I could run and store outputs with iter = 5000

Could either store within package or at a stable online location (GitHub?)

be-green commented 4 years ago

Could we compute the stan models, store them via posteriordb and access them on github during the vignette compilation process? https://github.com/MansMeg/posteriordb/tree/master/rpackage That way we wouldn't need to run anything locally.

Disclaimer: I've never used this package, so I don't know if this would work.

wwiecek commented 4 years ago

I don't see much of an advantage in that. Or rather, I think it's maybe a solution if we were sure we wanted to store the results somewhere, but I thought we agreed that the first solution was to check if it is possible to submit precompiled Markdown packages in such a way that CRAN will not run all of the (lengthy) code. That is the only issue, I think.

AFAIK CRAN does use the precompiled doc anyway, but runs the code to check for any errors. Or something like that.

be-green commented 4 years ago

That's fair, just a passing thought when I was reading about the package.

wwiecek commented 4 years ago

Sure -- didn't mean to shoot it down entirely!