wwood / CoverM

Read coverage calculator for metagenomics
GNU General Public License v3.0
311 stars 31 forks source link

build(deps): update bio requirement from 0.41.0 to 0.42.0 #131

Closed dependabot[bot] closed 2 years ago

dependabot[bot] commented 2 years ago

Updates the requirements on bio to permit the latest version.

Changelog

Sourced from bio's changelog.

0.42.0 (2022-08-30)

⚠ BREAKING CHANGES

  • Update strum and ordered-float dependencies and change From into TryFrom for NotNan. (#491)

Features

  • Update strum and ordered-float dependencies and change From into TryFrom for NotNan. (#491) (57ccf8f)

Miscellaneous Chores

0.41.0 (2022-03-30)

Features

  • adaptive integration of density functions using a binary search approach that tries to achieve good resolution around the maximum (#486) (207b76f)

0.40.0 (2022-02-25)

Features

  • base specific hop parameters in homopoly-pair-hmm (#480) (cf75b6c)

Miscellaneous Chores

0.39.2 (2022-02-09)

Bug Fixes

  • Make QGramIndex use less memory; fix bug; improve tests&docs (#471) (48bac1c)
  • overflow in qgrams for k=32 (#478) (8048eb8)

0.39.1 (2022-01-12)

Bug Fixes

  • added code to ignore commented lines in a bed file (#474) (d17f823)

0.39.0 (2021-10-20)

... (truncated)

Commits


Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting @dependabot rebase.


Dependabot commands and options
You can trigger Dependabot actions by commenting on this PR: - `@dependabot rebase` will rebase this PR - `@dependabot recreate` will recreate this PR, overwriting any edits that have been made to it - `@dependabot merge` will merge this PR after your CI passes on it - `@dependabot squash and merge` will squash and merge this PR after your CI passes on it - `@dependabot cancel merge` will cancel a previously requested merge and block automerging - `@dependabot reopen` will reopen this PR if it is closed - `@dependabot close` will close this PR and stop Dependabot recreating it. You can achieve the same result by closing it manually - `@dependabot ignore this major version` will close this PR and stop Dependabot creating any more for this major version (unless you reopen the PR or upgrade to it yourself) - `@dependabot ignore this minor version` will close this PR and stop Dependabot creating any more for this minor version (unless you reopen the PR or upgrade to it yourself) - `@dependabot ignore this dependency` will close this PR and stop Dependabot creating any more for this dependency (unless you reopen the PR or upgrade to it yourself)
dependabot[bot] commented 2 years ago

Superseded by #136.