wwood / CoverM

Read coverage calculator for metagenomics
GNU General Public License v3.0
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build(deps): update bio requirement from 0.41.0 to 0.42.0 #131

Closed dependabot[bot] closed 1 year ago

dependabot[bot] commented 1 year ago

Updates the requirements on bio to permit the latest version.

Changelog

Sourced from bio's changelog.

0.42.0 (2022-08-30)

⚠ BREAKING CHANGES

  • Update strum and ordered-float dependencies and change From into TryFrom for NotNan. (#491)

Features

  • Update strum and ordered-float dependencies and change From into TryFrom for NotNan. (#491) (57ccf8f)

Miscellaneous Chores

0.41.0 (2022-03-30)

Features

  • adaptive integration of density functions using a binary search approach that tries to achieve good resolution around the maximum (#486) (207b76f)

0.40.0 (2022-02-25)

Features

  • base specific hop parameters in homopoly-pair-hmm (#480) (cf75b6c)

Miscellaneous Chores

0.39.2 (2022-02-09)

Bug Fixes

  • Make QGramIndex use less memory; fix bug; improve tests&docs (#471) (48bac1c)
  • overflow in qgrams for k=32 (#478) (8048eb8)

0.39.1 (2022-01-12)

Bug Fixes

  • added code to ignore commented lines in a bed file (#474) (d17f823)

0.39.0 (2021-10-20)

... (truncated)

Commits


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dependabot[bot] commented 1 year ago

Superseded by #136.