wwood / CoverM

Read coverage calculator for metagenomics
GNU General Public License v3.0
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how to change the temporary directory #140

Closed lonestarling closed 2 years ago

lonestarling commented 2 years ago

Hi

I always meet the error "thread 'main' panicked at 'called Result::unwrap() on an Err value: Custom { kind: StorageFull, error: PathError { path: "/tmp/.tmpoLeFBK", err: Os { code: 28, kind: StorageFull, messa> note: run with RUST_BACKTRACE=1 environment variable to display a backtrace" i think the key is how to change the temporary dierctiory manually rather the default /tmp dierctory. So how could i change? Thanks! L

wwood commented 2 years ago

Yes, see https://wwood.github.io/CoverM/coverm-genome.html#frequently-asked-questions-faq

Ok? -------------- Ben Woodcroft Group leader, Centre for Microbiome Research, QUT


From: lonestarling @.> Sent: Friday, 4 November 2022, 10:38 am To: wwood/CoverM @.> Cc: Subscribed @.***> Subject: [wwood/CoverM] how to change the temporary directory (Issue #140)

Hi

I always meet the error "thread 'main' panicked at 'called Result::unwrap() on an Err value: Custom { kind: StorageFull, error: PathError { path: "/tmp/.tmpoLeFBK", err: Os { code: 28, kind: StorageFull, messa> note: run with RUST_BACKTRACE=1 environment variable to display a backtrace" i think the key is how to change the temporary dierctiory manually rather the default /tmp dierctory. So how could i change? Thanks! L

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lonestarling commented 2 years ago

Thank you professor, it helps a lot

wwood commented 2 years ago

No problem. OK, I guess you sorted this. Let me know if not.